The average train between Jena and Flensburg takes 8h 18m and the fastest train takes 6h 39m. The train service runs several times per day from Jena to Flensburg. The journey time may be longer on weekends and holidays; use the search form on this page to search for a specific travel date.
Trains run 4 times a day between Jena and Flensburg. The earliest departure is at 3:58 AM at night, and the last departure from Jena is at 7:48 PM which arrives into Flensburg at 7:43 AM. All services require a transfer at Leipzig Hbf and take an average of 8h 18m. The schedules shown below are for the next available departures.


7h 43m • 2 changes


7h 57m • 2 changes


7h 55m • 2 changes


7h 53m • 2 changes


7h 43m • 2 changes


7h 57m • 2 changes


7h 55m • 2 changes


7h 53m • 2 changes


7h 43m • 2 changes


7h 57m • 2 changes


7h 55m • 2 changes


7h 53m • 2 changes
Want to know about travelling from Jena to Flensburg? We have put together a list of the most frequently asked questions from our users such as: What is the cheapest mode of transport? What is the quickest option? How much do tickets usually cost? and many more.
No, there is no direct train from Jena to Flensburg. However, there are services departing from Jena station and arriving at Flensburg station via Leipzig Hbf. The journey, including transfers, takes approximately 8h 18m.
Jena to Flensburg train services, operated by ABELLIO Rail Mitteldeutschland GmbH, depart from Jena Paradies station.
Jena to Flensburg train services, operated by ABELLIO Rail Mitteldeutschland GmbH, arrive at Flensburg station.
Book your Jena to Flensburg train tickets online with ABELLIO Rail Mitteldeutschland GmbH, Deutsche Bahn Intercity (DB IC) and 2 other operators.
The distance between Jena and Flensburg is 452.3 km. The road distance is 718 km.
You can take a train from Jena Paradies to Flensburg via Leipzig Hbf and Hamburg Hbf in around 7h 27m.