The average train between Münster and Flensburg takes 5h 2m and the fastest train takes 4h 43m. There is a train service every few hours from Münster to Flensburg. The journey time may be longer on weekends and holidays; use the search form on this page to search for a specific travel date.
Trains run hourly between Münster and Flensburg. The earliest departure is at 4:14 AM at night, and the last departure from Münster is at 10:48 PM which arrives into Flensburg at 7:43 AM. All services require a transfer, and take on average 5h 2m. The schedules shown below are for the next available departures.

4h 46m • 1 change

4h 43m • 1 change
Arrives next day

4h 45m • 1 change
Arrives next day

8h 55m • 1 change

5h 20m • 1 change

4h 45m • 1 change

4h 45m • 1 change

4h 45m • 1 change

5h 27m • 1 change

4h 45m • 1 change

4h 45m • 1 change

4h 45m • 1 change

5h 27m • 1 change

4h 45m • 1 change

4h 45m • 1 change

4h 45m • 1 change
Want to know about travelling from Münster to Flensburg? We have put together a list of the most frequently asked questions from our users such as: What is the cheapest mode of transport? What is the quickest option? How much do tickets usually cost? and many more.
No, there is no direct train from Münster to Flensburg. However, there are services departing from Münster station and arriving at Flensburg station via Hamburg Hbf. The journey, including transfers, takes approximately 5h 2m.
Münster to Flensburg train services, operated by Deutsche Bahn Intercity (DB IC), depart from Münster Hauptbahnhof station.
Münster to Flensburg train services, operated by Deutsche Bahn Intercity (DB IC), arrive at Flensburg station.
Book your Münster to Flensburg train tickets online with Deutsche Bahn Intercity (DB IC) and Deutsche Bahn Regio (DB Regional).
The distance between Münster and Flensburg is 336 km. The road distance is 459 km.
You can take a train from Münster Hauptbahnhof to Flensburg via Hamburg Hbf in around 4h 58m.