The average train between Pier 39 and San Jose takes 1h 28m and the fastest train takes 1h 21m. The train service runs several times per day from Pier 39 to San Jose. The journey time may be longer on weekends and holidays; use the search form on this page to search for a specific travel date.
Trains run 5 times a day between Pier 39 and San Jose. The earliest departure is at 7:43 AM in the morning, and the last departure from Pier 39 is at 7:28 PM which arrives into San Jose at 8:54 PM. All services require a transfer at Beach St & Stockton St and take an average of 1h 28m. The schedules shown below are for the next available departures.

1h 31m • 1 change

1h 31m • 1 change

1h 31m • 1 change

1h 31m • 1 change
Want to know about travelling from Pier 39 to San Jose? We have put together a list of the most frequently asked questions from our users such as: What is the cheapest mode of transport? What is the quickest option? How much do tickets usually cost? and many more.
No, there is no direct train from Pier 39 to San Jose. However, there are services departing from Pier 39 station and arriving at San Jose station via Berryessa / North San Jose. The journey, including transfers, takes approximately 1h 28m.
Pier 39 to San Jose train services, operated by San Francisco Municipal Transportation Agency, depart from Embarcadero station.
Pier 39 to San Jose train services, operated by San Francisco Municipal Transportation Agency, arrive at Berryessa / North San Jose station.
The distance between Pier 39 and San Jose is 69.1 km. The road distance is 76 km.
BART operates a subway from Embarcadero to Berryessa / North San Jose every 30 minutes. Tickets cost $8–12 and the journey takes 1h 5m.