The average train between Prague and Flensburg takes 8h 57m and the fastest train takes 8h. The train service runs several times per day from Prague to Flensburg. The journey time may be longer on weekends and holidays; use the search form on this page to search for a specific travel date.
Trains run 5 times a day between Prague and Flensburg. The earliest departure is at 6:41 AM in the morning, and the last departure from Prague is at 4:41 PM which arrives into Flensburg at 12:41 AM. All services require a transfer, and take on average 8h 57m. The schedules shown below are for the next available departures.

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Want to know about travelling from Prague to Flensburg? We have put together a list of the most frequently asked questions from our users such as: What is the cheapest mode of transport? What is the quickest option? How much do tickets usually cost? and many more.
No, there is no direct train from Prague to Flensburg. However, there are services departing from Prague station and arriving at Flensburg station via Hamburg Hbf. The journey, including transfers, takes approximately 8h 57m.
Prague to Flensburg train services, operated by České dráhy (ČD), depart from Praha-Holesovice station.
Prague to Flensburg train services, operated by České dráhy (ČD), arrive at Flensburg station.
Book your Prague to Flensburg train tickets online with České dráhy (ČD), Deutsche Bahn Regio (DB Regional) and 2 other operators.
The distance between Prague and Flensburg is 621.5 km. The road distance is 826 km.
You can take a train from Praha-Holesovice to Flensburg via Hamburg Hbf in around 8h 25m.