There are 3 ways to get from San Diego to San Juan by plane or car
Select an option below to see step-by-step directions and to compare ticket prices and travel times in Rome2Rio's travel planner.
Fly to Luis Munoz Marin International Airport
best- Fly from San Diego International Airport (SAN) to Luis Munoz Marin International Airport (SJU)plane SAN - SJU
9h 6m$282–899Fly to Eugenio María De Hostos Airport, drive
cheapest- Fly from San Diego International Airport (SAN) to Eugenio María De Hostos Airport (MAZ)plane SAN - MAZ
- Drive from Eugenio María De Hostos Airport (MAZ) to San Juancar
16h 25m$150–506Fly to Aguadilla, drive
- Fly from San Diego International Airport (SAN) to Aguadilla (BQN)plane SAN - BQN
- Drive from Aguadilla (BQN) to San Juancar
13h 42m$243–856
San Diego International Airport (SAN) to Luis Munoz Marin International Airport (SJU) flights
Questions & Answers
The cheapest way to get from San Diego to San Juan is to fly and drive which costs $150 - $550 and takes 16h 25m.
The fastest way to get from San Diego to San Juan is to fly which takes 9h 6m and costs $280 - $900.
The distance between San Diego and San Juan is 5333 km.
It takes approximately 9h 6m to get from San Diego to San Juan, including transfers.
San Juan is 3h ahead of San Diego. It is currently 8:54 AM in San Diego and 11:54 AM in San Juan.
There are 1224+ hotels available in San Juan.
What companies run services between San Diego, CA, USA and San Juan, Puerto Rico?
Southwest Airlines, Delta, and two other airlines fly from San Diego International Airport (SAN) to Luis Munoz Marin International Airport (SJU) 4 times a day.
- Website
- jetblue.com
Flights from San Diego International Airport to Luis Munoz Marin International Airport via Fort Lauderdale
- Ave. Duration
- 8h 16m
- When
- Saturday
- Estimated price
- $220–850
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Miami, Luis Munoz Marin International Airport
- Ave. Duration
- 17h 49m
- When
- Every day
- Estimated price
- $130–490
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Nashville, Luis Munoz Marin International Airport
- Ave. Duration
- 17h 3m
- When
- Friday
- Estimated price
- $140–500
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Fort Lauderdale, Luis Munoz Marin International Airport
- Ave. Duration
- 20h 1m
- When
- Every day
- Estimated price
- $210–800
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Austin, Luis Munoz Marin International Airport
- Ave. Duration
- 20h 28m
- When
- Friday
- Estimated price
- $130–490
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Orlando, Luis Munoz Marin International Airport
- Ave. Duration
- 21h 27m
- When
- Tuesday and Wednesday
- Estimated price
- $130–490
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Houston, Luis Munoz Marin International Airport
- Ave. Duration
- 22h 42m
- When
- Every day
- Estimated price
- $130–490
Flights from San Diego International Airport to Aguadilla via New York JFK
- Ave. Duration
- 19h 6m
- When
- Every day
- Estimated price
- $270–1,000
Flights from San Diego International Airport to Aguadilla via Fort Lauderdale
- Ave. Duration
- 12h 8m
- When
- Saturday
- Estimated price
- $220–850
Flights from San Diego International Airport to Aguadilla via Phoenix, Fort Lauderdale
- Ave. Duration
- 12h 23m
- When
- Saturday
- Estimated price
- $230–850
Flights from San Diego International Airport to Aguadilla via Houston Hobby Apt, Fort Lauderdale
- Ave. Duration
- 12h 58m
- When
- Tuesday and Wednesday
- Estimated price
- $230–850
- Website
- capeair.com
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Miami, Luis Munoz Marin International Airport
- Ave. Duration
- 17h 49m
- When
- Every day
- Estimated price
- $130–490
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Nashville, Luis Munoz Marin International Airport
- Ave. Duration
- 17h 3m
- When
- Friday
- Estimated price
- $140–500
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Austin, Luis Munoz Marin International Airport
- Ave. Duration
- 20h 28m
- When
- Friday
- Estimated price
- $130–490
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Orlando, Luis Munoz Marin International Airport
- Ave. Duration
- 21h 27m
- When
- Tuesday and Wednesday
- Estimated price
- $130–490
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Houston, Luis Munoz Marin International Airport
- Ave. Duration
- 22h 42m
- When
- Every day
- Estimated price
- $130–490
- Website
- southwest.com
Flights from San Diego International Airport to Luis Munoz Marin International Airport via Orlando
- Ave. Duration
- 9h 45m
- When
- Tuesday and Wednesday
- Estimated price
- $220–850
Flights from San Diego International Airport to Luis Munoz Marin International Airport via Houston Hobby Apt
- Ave. Duration
- 10h 5m
- When
- Saturday
- Estimated price
- $220–850
Flights from San Diego International Airport to Luis Munoz Marin International Airport via Tampa
- Ave. Duration
- 11h 25m
- When
- Monday, Thursday, and Friday
- Estimated price
- $220–850
Flights from San Diego International Airport to Luis Munoz Marin International Airport via Nashville
- Ave. Duration
- 14h 30m
- When
- Friday
- Estimated price
- $230–900
- Website
- united.com
Flights from San Diego International Airport to Eugenio María De Hostos Airport via Miami, Luis Munoz Marin International Airport
- Ave. Duration
- 14h 26m
- When
- Every day
- Estimated price
- $130–490
Flights from San Diego International Airport to Aguadilla via Newark
- Ave. Duration
- 12h 45m
- When
- Every day
- Estimated price
- $270–1,500
- Website
- delta.com
Flights from San Diego International Airport to Luis Munoz Marin International Airport via Atlanta
- Ave. Duration
- 10h 53m
- When
- Every day
- Estimated price
- $230–850
- Website
- aa.com
Flights from San Diego International Airport to Luis Munoz Marin International Airport via Miami
- Ave. Duration
- 11h 3m
- When
- Every day
- Estimated price
- $220–850
- Website
- flyfrontier.com
Flights from San Diego International Airport to Aguadilla via Orlando
- Ave. Duration
- 13h 30m
- When
- Every day
- Estimated price
- $380–1,400
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