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How to get fromSan Diego to San Juan Islandby plane, shuttle, ferry, bus, train, or taxi

Find Transport to San Juan Island

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There are 7 ways to get from San Diego to San Juan Island by plane, shuttle, ferry, bus, train, or taxi

Select an option below to see step-by-step directions and to compare ticket prices and travel times in Rome2Rio's travel planner.

  1. Fly to Paine Field County Airport, shuttle, ferry

    best
    1. Fly from San Diego International Airport (SAN) to Paine Field County Airport (PAE)plane plane SAN - PAE
    2. Take a shuttle bus from Paine Field Airport Terminal to Anacortes Ferry Dockshuttle bus
    3. Take the ferry from Anacortes to Friday Harborferry ferry
    8h 24m
    $183–780

  2. Fly to Roche Harbor

    cheapest
    1. Fly from San Diego International Airport (SAN) to Roche Harbor (RCE)plane plane SAN - RCE
    6h 55m
    $90–430

  3. Bus, ferry

    1. Take the bus from San Diego Greyhound Bus Stop to Sacramento Bus Stationbus bus
    2. Take the bus from Sacramento Bus Station to Seattle Tacoma Intl Airportbus bus
    3. Take the bus from SeaTac Airport - Departures to NAS Whidbey - Gateway Innbus bus
    4. Take the ferry from Anacortes to Friday Harborferry ferry
    38h 39m
    $275–514

  4. Bus, train, shuttle, ferry

    1. Take the bus from San Diego to Los Angelesbus bus
    2. Take the train from Los Angeles to Centralia Amtrak Stationtrain train
    3. Take the train from Centralia Amtrak Station to Tukwila Amtraktrain train
    4. Take a shuttle bus from Seattle-Tacoma International Airport to Anacortes Ferry Dockshuttle bus
    5. Take the ferry from Anacortes to Friday Harborferry ferry
    44h 30m
    $515–1,087

  5. Fly to Seattle-Tacoma International Airport, shuttle, ferry

    1. Fly from San Diego International Airport (SAN) to Seattle-Tacoma International Airport (SEA)plane plane SAN - SEA
    2. Take a shuttle bus from Seattle-Tacoma International Airport to Anacortes Ferry Dockshuttle bus
    3. Take the ferry from Anacortes to Friday Harborferry ferry
    8h 49m
    $170–497

  6. Fly to Vancouver International Airport, bus, shuttle, ferry

    1. Fly from San Diego International Airport (SAN) to Vancouver International Airport (YVR)plane plane SAN - YVR
    2. Take the bus from River Rock Casino Resort, Richmond to Bellingham Airportbus bus
    3. Take a shuttle bus from Bellingham Airport to Burlington Airporter Officeshuttle bus
    4. Take the ferry from Anacortes to Friday Harborferry ferry
    12h 11m
    $252–1,030

  7. Train, taxi, ferry

    1. Take the train from San Diego to Los Angelestrain train
    2. Take the train from Los Angeles to Centralia Amtrak Stationtrain train
    3. Take the train from Centralia Amtrak Station to Bellingham Amtrak Stationtrain train
    4. Take the taxi from Bellingham Amtrak Station to 10th St and Q Avetaxi taxi
    5. Take the ferry from Anacortes to Friday Harborferry ferry
    45h 13m
    $605–1,234

San Diego International Airport (SAN) to Paine Field County Airport (PAE) flights

Calendar33Weekly Planes
Duration4h 56mAverage Duration
Ticket$152Cheapest Price
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Questions & Answers

Map of how to get from San Diego to San Juan Island.ExpandLaunch map view
  • Distance: 1,168.3 mi
  • Duration: 8h 24m

What companies run services between San Diego, CA, USA and San Juan Island, WA, USA?

Alaska Airlines, Inc., San Juan Airlines, and three other airlines fly from San Diego International Airport (SAN) to Roche Harbor (RCE) twice daily.

Airlines
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